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 G

O. Gotoh,
An improved algorithm for matching biological sequences.
Journal of Molecular Biology 162 (1982) 705708.
 GM

F. Gouvêa and B. Mazur, On the characteristic series of the U
operator. Ann. Inst. Fourier 43 (1993) 301312.
 H

J. Hein, An algorithm for statistical alignment of
sequences related by a binary tree. Preprint.
 H+

Hein, J, C. Wiuf, B. Knudsen, M. B. Møller, and G. Wibling,
``Statistical alignment: computational properties, homology testing and
goodnessoffit.'' J. Mol. Biol. 302:265279 (2000).
 Ki

L. J. P. Kilford, Slopes of overconvergent modular forms.
Ph. D. thesis. Imperial College of Science, Technology and Medicine,
London (2002).
 LGS

C. Lee, C. Grasso, M. Sharlow,
Multiple sequence alignment using partial order graphs.
Bioinformatics 18 (2002) 452464.
 L+

Lunter, G. A., I. Miklós, Y. S. Song, and J. Hein, ``An efficient
algorithm for statistical multiple
alignment on arbitrary phylogenetic trees.'' Preprint (April 2003).
 NHH

C. Notredame, D. G. Higgins, and J. Heringa,
Tcoffee: a novel method for fast and accurate multiple sequence
alignment. Journal of Molecular Biology 302 (2000) 205217.
 SN

N. Saitou and M. Nei,
The neighborjoining method: a new method for
reconstructing phylogenetic trees.
Molecular Biology and Evolution 4 (1987) 406425.
 SW

T. F. Smith and M. S. Waterman,
Identification of common molecular subsequences.
Journal of Molecular Biology 147 (1981) 195197.
 Sm

L. M. Smithline, Exploring slopes of adic modular forms.
Ph. D. thesis. University of California, Berkeley (2000).
 Sm2

, Compact operators with rational generation. Proceedings of
the Canadian Number Theory Association VII, Montreal (to appear).
 Sm3

, Bounding slopes of adic modular forms. Submitted.
 Sm4

, Computing lowest slopes of adic modular forms. Submitted.
 Sm5

. Probabilistic pairwise sequence alignment. Preprint.
 TKF

J. L. Thorne, H. Kishino, and J. Felsenstein,
An evolutionary model for maximum likelihood alignment
of DNA sequences. Journal of Molecular Evolution 33 (1991) 114124.
Lawren Smithline
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