Alignment of zinc finger protein mRNAs

Figure 1: Comparison of zinc finger protein mRNA seqences for Mus musculus Zfp111 and Zfp235. The normalized likelihood array shows: high sequence identity to coordinate (537, 540), then a mismatch with a net insertion of 222 bases in Zfp235. In the rectangle with bottom left corner (622, 844) and top right corner (2106, 2112), there are many parallel tracks, with parts of three more intense than the others. Closer analysis of the parallel tracks reveals the internal repeat structure among the zinc finger functional groups.